Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.83■□□□□ 0.28
Sdf4Q61112 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sdf4Q61112 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Sdf4Q61112 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Gm22697-201ENSMUST00000175194 63 ntBASIC16.82■□□□□ 0.28
Sdf4Q61112 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Sdf4Q61112 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Phf7-203ENSMUST00000226565 1971 ntBASIC16.82■□□□□ 0.28
Sdf4Q61112 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sdf4Q61112 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdf4Q61112 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdf4Q61112 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.81■□□□□ 0.28
Sdf4Q61112 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdf4Q61112 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Gm10566-201ENSMUST00000086739 996 ntBASIC16.81■□□□□ 0.28
Sdf4Q61112 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdf4Q61112 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdf4Q61112 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdf4Q61112 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.8■□□□□ 0.28
Sdf4Q61112 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sdf4Q61112 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.8■□□□□ 0.28
Sdf4Q61112 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Gm10013-201ENSMUST00000106074 672 ntBASIC16.8■□□□□ 0.28
Sdf4Q61112 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.8■□□□□ 0.28
Sdf4Q61112 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sdf4Q61112 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sdf4Q61112 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sdf4Q61112 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.8■□□□□ 0.28
Sdf4Q61112 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdf4Q61112 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Gm18032-201ENSMUST00000222541 538 ntBASIC16.79■□□□□ 0.28
Sdf4Q61112 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sdf4Q61112 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.79■□□□□ 0.28
Sdf4Q61112 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms