Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.03□□□□□ -0.16
Scarb1Q61009 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Scarb1Q61009 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.02□□□□□ -0.16
Scarb1Q61009 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.02□□□□□ -0.16
Scarb1Q61009 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb1Q61009 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Scarb1Q61009 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb1Q61009 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scarb1Q61009 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Gm26571-201ENSMUST00000181399 666 ntBASIC14.01□□□□□ -0.17
Scarb1Q61009 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.01□□□□□ -0.17
Scarb1Q61009 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb1Q61009 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scarb1Q61009 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14□□□□□ -0.17
Scarb1Q61009 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14□□□□□ -0.17
Scarb1Q61009 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14□□□□□ -0.17
Scarb1Q61009 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Scarb1Q61009 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Scarb1Q61009 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scarb1Q61009 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb1Q61009 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms