Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.84■□□□□ 0.13
Nr1h4Q60641 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1h4Q60641 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1h4Q60641 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nr1h4Q60641 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1h4Q60641 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.82■□□□□ 0.12
Nr1h4Q60641 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.82■□□□□ 0.12
Nr1h4Q60641 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1h4Q60641 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Gm27275-201ENSMUST00000184318 272 ntBASIC15.81■□□□□ 0.12
Nr1h4Q60641 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.81■□□□□ 0.12
Nr1h4Q60641 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1h4Q60641 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.8■□□□□ 0.12
Nr1h4Q60641 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.8■□□□□ 0.12
Nr1h4Q60641 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.8■□□□□ 0.12
Nr1h4Q60641 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Gm43183-201ENSMUST00000200632 547 ntBASIC15.8■□□□□ 0.12
Nr1h4Q60641 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.8■□□□□ 0.12
Nr1h4Q60641 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1h4Q60641 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms