Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom1Q5SX79 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Gm24589-201ENSMUST00000116692 94 ntBASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom1Q5SX79 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Gm34391-201ENSMUST00000203706 907 ntBASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Birc2-201ENSMUST00000054878 378 ntBASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shroom1Q5SX79 Phf7-203ENSMUST00000226565 1971 ntBASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Gm7461-201ENSMUST00000058918 827 ntBASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shroom1Q5SX79 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Shroom1Q5SX79 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Shroom1Q5SX79 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shroom1Q5SX79 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms