Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna2d4Q5RJF7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna2d4Q5RJF7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gm26039-201ENSMUST00000158152 144 ntBASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gm18032-201ENSMUST00000222541 538 ntBASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.48■□□□□ 0.55
Cacna2d4Q5RJF7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Gm10013-201ENSMUST00000106074 672 ntBASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna2d4Q5RJF7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Gm13186-201ENSMUST00000118031 316 ntBASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Gm21559-201ENSMUST00000220638 855 ntBASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Gm8587-201ENSMUST00000076538 843 ntBASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna2d4Q5RJF7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms