Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Gm17807-201ENSMUST00000186869 298 ntBASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.24□□□□□ -0.29
Trav2Q5R1I9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav2Q5R1I9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.23□□□□□ -0.29
Trav2Q5R1I9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Gm27742-201ENSMUST00000184667 60 ntBASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Gm29707-201ENSMUST00000196325 491 ntBASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Haglr-201ENSMUST00000100000 2085 ntBASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav2Q5R1I9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav2Q5R1I9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms