Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.96□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms