Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Gm7889-201ENSMUST00000185591 958 ntBASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim58Q5NCC9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim58Q5NCC9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Mir1668-201ENSMUST00000184114 107 ntBASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim58Q5NCC9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.97■□□□□ 0.95
Trim58Q5NCC9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gm45058-201ENSMUST00000205810 766 ntBASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gm10252-201ENSMUST00000209541 832 ntBASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim58Q5NCC9 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.95■□□□□ 0.95
Trim58Q5NCC9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim58Q5NCC9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Gm15565-201ENSMUST00000118890 427 ntBASIC20.95■□□□□ 0.94
Trim58Q5NCC9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Gm18421-201ENSMUST00000204122 625 ntBASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim58Q5NCC9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Mir5130-201ENSMUST00000175160 84 ntBASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim58Q5NCC9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms