Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne3Q4FZC9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Gm45058-201ENSMUST00000205810 766 ntBASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne3Q4FZC9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Syne3Q4FZC9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syne3Q4FZC9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Syne3Q4FZC9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Syne3Q4FZC9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne3Q4FZC9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne3Q4FZC9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms