Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cnga4Q3UW12 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Gm4968-201ENSMUST00000071458 858 ntBASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cnga4Q3UW12 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cnga4Q3UW12 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cnga4Q3UW12 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cnga4Q3UW12 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Gm4974-201ENSMUST00000209974 875 ntBASIC16.87■□□□□ 0.29
Cnga4Q3UW12 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cnga4Q3UW12 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms