Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm29609Q3UU56 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm29609Q3UU56 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm29609Q3UU56 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Gm11594-201ENSMUST00000122313 162 ntBASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm29609Q3UU56 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Gm27742-201ENSMUST00000184667 60 ntBASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Gm29609Q3UU56 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gm18195-201ENSMUST00000207604 706 ntBASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gm5186-201ENSMUST00000218781 920 ntBASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.36■□□□□ 0.37
Gm29609Q3UU56 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm29609Q3UU56 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms