Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Gm26039-201ENSMUST00000158152 144 ntBASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdkl5Q3UTQ8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Gm44450-201ENSMUST00000199528 114 ntBASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdkl5Q3UTQ8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdkl5Q3UTQ8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Gm27389-201ENSMUST00000183622 195 ntBASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdkl5Q3UTQ8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkl5Q3UTQ8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdkl5Q3UTQ8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms