Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.84■□□□□ 0.29
Naf1Q3UMQ8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Naf1Q3UMQ8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Naf1Q3UMQ8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Naf1Q3UMQ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Naf1Q3UMQ8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Naf1Q3UMQ8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Naf1Q3UMQ8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms