Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Smn1P97801 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smn1P97801 Gm10517-202ENSMUST00000192970 758 ntBASIC14.27□□□□□ -0.13
Smn1P97801 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smn1P97801 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smn1P97801 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smn1P97801 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.26□□□□□ -0.13
Smn1P97801 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Gm12382-201ENSMUST00000122005 922 ntBASIC14.26□□□□□ -0.13
Smn1P97801 Gm13158-201ENSMUST00000122007 736 ntBASIC14.26□□□□□ -0.13
Smn1P97801 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.26□□□□□ -0.13
Smn1P97801 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smn1P97801 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.26□□□□□ -0.13
Smn1P97801 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smn1P97801 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.25□□□□□ -0.13
Smn1P97801 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smn1P97801 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.25□□□□□ -0.13
Smn1P97801 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.25□□□□□ -0.13
Smn1P97801 Gm24841-201ENSMUST00000158676 357 ntBASIC14.25□□□□□ -0.13
Smn1P97801 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.25□□□□□ -0.13
Smn1P97801 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Smn1P97801 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smn1P97801 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smn1P97801 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.24□□□□□ -0.13
Smn1P97801 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.24□□□□□ -0.13
Smn1P97801 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.24□□□□□ -0.13
Smn1P97801 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.24□□□□□ -0.13
Smn1P97801 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Gm37292-201ENSMUST00000192062 758 ntBASIC14.24□□□□□ -0.13
Smn1P97801 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.24□□□□□ -0.13
Smn1P97801 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smn1P97801 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.24□□□□□ -0.13
Smn1P97801 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Smn1P97801 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smn1P97801 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms