Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.67■□□□□ 0.1
Nkx3-2P97503 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.66■□□□□ 0.1
Nkx3-2P97503 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx3-2P97503 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx3-2P97503 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm9103-201ENSMUST00000119371 405 ntBASIC15.64■□□□□ 0.09
Nkx3-2P97503 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm45328-201ENSMUST00000210942 917 ntBASIC15.64■□□□□ 0.09
Nkx3-2P97503 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.64■□□□□ 0.09
Nkx3-2P97503 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx3-2P97503 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Gm13186-201ENSMUST00000118031 316 ntBASIC15.63■□□□□ 0.09
Nkx3-2P97503 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx3-2P97503 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms