Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SgcbP82349 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.8□□□□□ -0.04
SgcbP82349 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SgcbP82349 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.8□□□□□ -0.04
SgcbP82349 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Gm5587-201ENSMUST00000206270 674 ntBASIC14.8□□□□□ -0.04
SgcbP82349 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.8□□□□□ -0.04
SgcbP82349 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SgcbP82349 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Phf7-203ENSMUST00000226565 1971 ntBASIC14.8□□□□□ -0.04
SgcbP82349 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcbP82349 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SgcbP82349 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Gm37722-201ENSMUST00000193757 208 ntBASIC14.79□□□□□ -0.04
SgcbP82349 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.79□□□□□ -0.04
SgcbP82349 Gm18115-201ENSMUST00000221209 621 ntBASIC14.79□□□□□ -0.04
SgcbP82349 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.79□□□□□ -0.04
SgcbP82349 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcbP82349 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcbP82349 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.78□□□□□ -0.04
SgcbP82349 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.78□□□□□ -0.04
SgcbP82349 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.78□□□□□ -0.04
SgcbP82349 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.78□□□□□ -0.04
SgcbP82349 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SgcbP82349 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcbP82349 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms