Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.53□□□□□ -0.08
Lsm6P62313 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Lsm6P62313 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.53□□□□□ -0.08
Lsm6P62313 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.53□□□□□ -0.08
Lsm6P62313 Mir1668-201ENSMUST00000184114 107 ntBASIC14.53□□□□□ -0.08
Lsm6P62313 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lsm6P62313 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm6P62313 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.53□□□□□ -0.08
Lsm6P62313 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Lsm6P62313 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.52□□□□□ -0.08
Lsm6P62313 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.52□□□□□ -0.08
Lsm6P62313 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm6P62313 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Lsm6P62313 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.52□□□□□ -0.09
Lsm6P62313 Mir5130-201ENSMUST00000175160 84 ntBASIC14.52□□□□□ -0.09
Lsm6P62313 Gm45058-201ENSMUST00000205810 766 ntBASIC14.52□□□□□ -0.09
Lsm6P62313 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.52□□□□□ -0.09
Lsm6P62313 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Lsm6P62313 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Lsm6P62313 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm6P62313 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lsm6P62313 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.51□□□□□ -0.09
Lsm6P62313 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.51□□□□□ -0.09
Lsm6P62313 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm6P62313 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm6P62313 Gm43799-201ENSMUST00000201845 579 ntBASIC14.51□□□□□ -0.09
Lsm6P62313 Gm18959-201ENSMUST00000208954 655 ntBASIC14.51□□□□□ -0.09
Lsm6P62313 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.51□□□□□ -0.09
Lsm6P62313 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Lsm6P62313 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm6P62313 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.5□□□□□ -0.09
Lsm6P62313 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm6P62313 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms