Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.55■□□□□ 0.56
Tpm1P58771 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Tpm1P58771 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.55■□□□□ 0.56
Tpm1P58771 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Tpm1P58771 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tpm1P58771 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tpm1P58771 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.54■□□□□ 0.56
Tpm1P58771 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.54■□□□□ 0.56
Tpm1P58771 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.54■□□□□ 0.56
Tpm1P58771 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.54■□□□□ 0.56
Tpm1P58771 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tpm1P58771 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tpm1P58771 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Tpm1P58771 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tpm1P58771 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.53■□□□□ 0.56
Tpm1P58771 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Tpm1P58771 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Tpm1P58771 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tpm1P58771 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tpm1P58771 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Tpm1P58771 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tpm1P58771 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tpm1P58771 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.53■□□□□ 0.56
Tpm1P58771 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.52■□□□□ 0.56
Tpm1P58771 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.52■□□□□ 0.56
Tpm1P58771 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.52■□□□□ 0.56
Tpm1P58771 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tpm1P58771 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tpm1P58771 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.52■□□□□ 0.55
Tpm1P58771 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tpm1P58771 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tpm1P58771 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Dio3-201ENSMUST00000097228 1449 ntBASIC18.51■□□□□ 0.55
Tpm1P58771 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.51■□□□□ 0.55
Tpm1P58771 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.51■□□□□ 0.55
Tpm1P58771 Gm4974-201ENSMUST00000209974 875 ntBASIC18.51■□□□□ 0.55
Tpm1P58771 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.51■□□□□ 0.55
Tpm1P58771 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms