Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Usp25P57080 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp25P57080 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp25P57080 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp25P57080 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp25P57080 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Usp25P57080 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.8■□□□□ 0.6
Usp25P57080 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.8■□□□□ 0.6
Usp25P57080 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.8■□□□□ 0.6
Usp25P57080 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gm10517-202ENSMUST00000192970 758 ntBASIC18.8■□□□□ 0.6
Usp25P57080 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp25P57080 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp25P57080 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp25P57080 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp25P57080 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp25P57080 Gm17661-201ENSMUST00000170317 270 ntBASIC18.79■□□□□ 0.6
Usp25P57080 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Usp25P57080 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp25P57080 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Usp25P57080 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp25P57080 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Usp25P57080 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
Usp25P57080 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp25P57080 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.78■□□□□ 0.6
Usp25P57080 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.78■□□□□ 0.6
Usp25P57080 Gm20049-201ENSMUST00000219950 730 ntBASIC18.78■□□□□ 0.6
Usp25P57080 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp25P57080 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp25P57080 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp25P57080 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms