Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
Atxn1P54254 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.43■□□□□ 0.22
Atxn1P54254 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.42■□□□□ 0.22
Atxn1P54254 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atxn1P54254 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Atxn1P54254 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.41■□□□□ 0.22
Atxn1P54254 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Gm23935-201ENSMUST00000102303 57 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Gm24270-201ENSMUST00000102326 57 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Gm12350-201ENSMUST00000121208 462 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Gm24245-201ENSMUST00000157318 57 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atxn1P54254 Gm29791-202ENSMUST00000207888 369 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Atxn1P54254 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atxn1P54254 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Atxn1P54254 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atxn1P54254 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.41■□□□□ 0.22
Atxn1P54254 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atxn1P54254 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Atxn1P54254 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.4■□□□□ 0.22
Atxn1P54254 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atxn1P54254 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atxn1P54254 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atxn1P54254 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atxn1P54254 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atxn1P54254 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.39■□□□□ 0.22
Atxn1P54254 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atxn1P54254 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.39■□□□□ 0.21
Atxn1P54254 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atxn1P54254 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Atxn1P54254 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.39■□□□□ 0.21
Atxn1P54254 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.39■□□□□ 0.21
Atxn1P54254 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Atxn1P54254 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.39■□□□□ 0.21
Atxn1P54254 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.39■□□□□ 0.21
Atxn1P54254 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.39■□□□□ 0.21
Atxn1P54254 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.39■□□□□ 0.21
Atxn1P54254 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atxn1P54254 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atxn1P54254 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms