Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.53■□□□□ 0.4
Rfc1P35601 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.53■□□□□ 0.4
Rfc1P35601 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfc1P35601 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc1P35601 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Rfc1P35601 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.52■□□□□ 0.4
Rfc1P35601 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.52■□□□□ 0.4
Rfc1P35601 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfc1P35601 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfc1P35601 Zfp783-201ENSMUST00000095946 670 ntBASIC17.52■□□□□ 0.4
Rfc1P35601 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc1P35601 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfc1P35601 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfc1P35601 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfc1P35601 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.51■□□□□ 0.39
Rfc1P35601 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Rfc1P35601 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Gm10418-201ENSMUST00000100943 576 ntBASIC17.51■□□□□ 0.39
Rfc1P35601 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.51■□□□□ 0.39
Rfc1P35601 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.51■□□□□ 0.39
Rfc1P35601 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rfc1P35601 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc1P35601 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.51■□□□□ 0.39
Rfc1P35601 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Rfc1P35601 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfc1P35601 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc1P35601 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.5■□□□□ 0.39
Rfc1P35601 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc1P35601 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Rfc1P35601 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfc1P35601 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfc1P35601 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfc1P35601 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfc1P35601 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc1P35601 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rfc1P35601 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rfc1P35601 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.48■□□□□ 0.39
Rfc1P35601 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms