Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hes1P35428 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.72□□□□□ -0.21
Hes1P35428 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hes1P35428 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hes1P35428 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hes1P35428 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.71□□□□□ -0.21
Hes1P35428 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hes1P35428 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Hes1P35428 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hes1P35428 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hes1P35428 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Gm18958-201ENSMUST00000174258 762 ntBASIC13.7□□□□□ -0.22
Hes1P35428 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.7□□□□□ -0.22
Hes1P35428 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hes1P35428 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hes1P35428 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Hes1P35428 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Hes1P35428 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Gm17661-201ENSMUST00000170317 270 ntBASIC13.69□□□□□ -0.22
Hes1P35428 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.69□□□□□ -0.22
Hes1P35428 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hes1P35428 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.69□□□□□ -0.22
Hes1P35428 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hes1P35428 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hes1P35428 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.68□□□□□ -0.22
Hes1P35428 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Hes1P35428 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.68□□□□□ -0.22
Hes1P35428 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Gm15565-201ENSMUST00000118890 427 ntBASIC13.68□□□□□ -0.22
Hes1P35428 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.68□□□□□ -0.22
Hes1P35428 Gm7791-201ENSMUST00000219066 539 ntBASIC13.68□□□□□ -0.22
Hes1P35428 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms