Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Gm15165-201ENSMUST00000118140 502 ntBASIC17.73■□□□□ 0.43
Mmp3P28862 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Mmp3P28862 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.73■□□□□ 0.43
Mmp3P28862 Gm44454-201ENSMUST00000198541 138 ntBASIC17.73■□□□□ 0.43
Mmp3P28862 Gm44771-201ENSMUST00000206975 626 ntBASIC17.73■□□□□ 0.43
Mmp3P28862 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.73■□□□□ 0.43
Mmp3P28862 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp3P28862 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp3P28862 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.72■□□□□ 0.43
Mmp3P28862 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.72■□□□□ 0.43
Mmp3P28862 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.72■□□□□ 0.43
Mmp3P28862 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp3P28862 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp3P28862 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp3P28862 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Gm11452-201ENSMUST00000122376 690 ntBASIC17.71■□□□□ 0.43
Mmp3P28862 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.71■□□□□ 0.43
Mmp3P28862 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.71■□□□□ 0.43
Mmp3P28862 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.71■□□□□ 0.43
Mmp3P28862 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp3P28862 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp3P28862 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp3P28862 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.71■□□□□ 0.42
Mmp3P28862 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Mmp3P28862 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.7■□□□□ 0.42
Mmp3P28862 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.7■□□□□ 0.42
Mmp3P28862 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.7■□□□□ 0.42
Mmp3P28862 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp3P28862 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp3P28862 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp3P28862 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp3P28862 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mmp3P28862 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.69■□□□□ 0.42
Mmp3P28862 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Mmp3P28862 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Mmp3P28862 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp3P28862 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp3P28862 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp3P28862 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms