Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nckap1P28660 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nckap1P28660 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nckap1P28660 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nckap1P28660 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.49■□□□□ 0.23
Nckap1P28660 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nckap1P28660 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nckap1P28660 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
Nckap1P28660 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nckap1P28660 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.48■□□□□ 0.23
Nckap1P28660 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.48■□□□□ 0.23
Nckap1P28660 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.48■□□□□ 0.23
Nckap1P28660 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Nckap1P28660 Gm28659-201ENSMUST00000188013 759 ntBASIC16.48■□□□□ 0.23
Nckap1P28660 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nckap1P28660 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nckap1P28660 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nckap1P28660 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nckap1P28660 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nckap1P28660 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nckap1P28660 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nckap1P28660 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.47■□□□□ 0.23
Nckap1P28660 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nckap1P28660 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nckap1P28660 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.47■□□□□ 0.23
Nckap1P28660 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.47■□□□□ 0.23
Nckap1P28660 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nckap1P28660 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Gm34391-201ENSMUST00000203706 907 ntBASIC16.47■□□□□ 0.23
Nckap1P28660 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.47■□□□□ 0.23
Nckap1P28660 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nckap1P28660 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nckap1P28660 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.46■□□□□ 0.23
Nckap1P28660 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nckap1P28660 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.46■□□□□ 0.23
Nckap1P28660 Gm43347-201ENSMUST00000200226 580 ntBASIC16.46■□□□□ 0.23
Nckap1P28660 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.46■□□□□ 0.23
Nckap1P28660 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nckap1P28660 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nckap1P28660 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.46■□□□□ 0.22
Nckap1P28660 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nckap1P28660 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
Nckap1P28660 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Nckap1P28660 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Gm10052-201ENSMUST00000168019 960 ntBASIC16.45■□□□□ 0.22
Nckap1P28660 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.45■□□□□ 0.22
Nckap1P28660 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Gm7729-201ENSMUST00000050143 801 ntBASIC16.45■□□□□ 0.22
Nckap1P28660 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nckap1P28660 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nckap1P28660 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms