Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pde6aP27664 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pde6aP27664 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pde6aP27664 Gm6623-201ENSMUST00000173570 544 ntBASIC19.24■□□□□ 0.67
Pde6aP27664 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pde6aP27664 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.24■□□□□ 0.67
Pde6aP27664 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pde6aP27664 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6aP27664 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pde6aP27664 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.23■□□□□ 0.67
Pde6aP27664 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.23■□□□□ 0.67
Pde6aP27664 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Pde6aP27664 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6aP27664 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pde6aP27664 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.22■□□□□ 0.67
Pde6aP27664 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Gm11950-201ENSMUST00000121615 838 ntBASIC19.22■□□□□ 0.67
Pde6aP27664 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.22■□□□□ 0.67
Pde6aP27664 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.22■□□□□ 0.67
Pde6aP27664 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.22■□□□□ 0.67
Pde6aP27664 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Pde6aP27664 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.22■□□□□ 0.67
Pde6aP27664 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.22■□□□□ 0.67
Pde6aP27664 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6aP27664 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Haglr-201ENSMUST00000100000 2085 ntBASIC19.21■□□□□ 0.67
Pde6aP27664 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pde6aP27664 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Pde6aP27664 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.21■□□□□ 0.67
Pde6aP27664 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pde6aP27664 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pde6aP27664 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pde6aP27664 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.21■□□□□ 0.67
Pde6aP27664 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6aP27664 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pde6aP27664 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pde6aP27664 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pde6aP27664 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms