Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.21■□□□□ 0.03
Hmgn1P18608 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hmgn1P18608 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn1P18608 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn1P18608 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn1P18608 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn1P18608 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn1P18608 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn1P18608 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.2■□□□□ 0.02
Hmgn1P18608 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Hmgn1P18608 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn1P18608 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Hmgn1P18608 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Hmgn1P18608 Gm9731-201ENSMUST00000209480 747 ntBASIC15.19■□□□□ 0.02
Hmgn1P18608 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hmgn1P18608 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hmgn1P18608 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hmgn1P18608 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgn1P18608 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.19■□□□□ 0.02
Hmgn1P18608 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.18■□□□□ 0.02
Hmgn1P18608 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Hmgn1P18608 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.18■□□□□ 0.02
Hmgn1P18608 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Gm18666-201ENSMUST00000190039 958 ntBASIC15.18■□□□□ 0.02
Hmgn1P18608 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Hmgn1P18608 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgn1P18608 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.17■□□□□ 0.02
Hmgn1P18608 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.17■□□□□ 0.02
Hmgn1P18608 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.17■□□□□ 0.02
Hmgn1P18608 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.17■□□□□ 0.02
Hmgn1P18608 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Hmgn1P18608 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hmgn1P18608 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms