Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CfdP03953 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CfdP03953 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
CfdP03953 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CfdP03953 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CfdP03953 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CfdP03953 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.9□□□□□ -0.18
CfdP03953 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CfdP03953 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.9□□□□□ -0.18
CfdP03953 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 AV356131-201ENSMUST00000206201 750 ntBASIC13.9□□□□□ -0.18
CfdP03953 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.9□□□□□ -0.18
CfdP03953 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.9□□□□□ -0.18
CfdP03953 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CfdP03953 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CfdP03953 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CfdP03953 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CfdP03953 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CfdP03953 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CfdP03953 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CfdP03953 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.89□□□□□ -0.19
CfdP03953 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Gm42642-201ENSMUST00000200683 355 ntBASIC13.89□□□□□ -0.19
CfdP03953 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CfdP03953 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.89□□□□□ -0.19
CfdP03953 Rab3c-203ENSMUST00000224180 967 ntBASIC13.89□□□□□ -0.19
CfdP03953 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CfdP03953 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.89□□□□□ -0.19
CfdP03953 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CfdP03953 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CfdP03953 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CfdP03953 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CfdP03953 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CfdP03953 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.88□□□□□ -0.19
CfdP03953 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.88□□□□□ -0.19
CfdP03953 Gm5408-201ENSMUST00000197998 747 ntBASIC13.88□□□□□ -0.19
CfdP03953 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CfdP03953 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CfdP03953 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CfdP03953 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CfdP03953 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CfdP03953 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CfdP03953 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CfdP03953 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CfdP03953 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CfdP03953 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CfdP03953 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.87□□□□□ -0.19
CfdP03953 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CfdP03953 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.87□□□□□ -0.19
CfdP03953 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.87□□□□□ -0.19
CfdP03953 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.87□□□□□ -0.19
CfdP03953 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms