Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3f3cP02301 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H3f3cP02301 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Gm10231-201ENSMUST00000181584 441 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Mir1668-201ENSMUST00000184114 107 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Mir7071-201ENSMUST00000184847 69 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Gm10175-202ENSMUST00000208752 441 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
H3f3cP02301 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.24□□□□□ -0.13
H3f3cP02301 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.24□□□□□ -0.13
H3f3cP02301 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3f3cP02301 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
H3f3cP02301 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3f3cP02301 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3cP02301 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.24□□□□□ -0.13
H3f3cP02301 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H3f3cP02301 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
H3f3cP02301 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.23□□□□□ -0.13
H3f3cP02301 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.23□□□□□ -0.13
H3f3cP02301 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3cP02301 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3f3cP02301 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3f3cP02301 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
H3f3cP02301 Actl10-202ENSMUST00000226583 1501 ntBASIC14.22□□□□□ -0.13
H3f3cP02301 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
H3f3cP02301 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.22□□□□□ -0.13
H3f3cP02301 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.22□□□□□ -0.13
H3f3cP02301 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Gm7213-201ENSMUST00000215977 950 ntBASIC14.22□□□□□ -0.13
H3f3cP02301 Gm18032-201ENSMUST00000222541 538 ntBASIC14.22□□□□□ -0.13
H3f3cP02301 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.22□□□□□ -0.13
H3f3cP02301 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H3f3cP02301 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.22□□□□□ -0.13
H3f3cP02301 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H3f3cP02301 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3cP02301 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
H3f3cP02301 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
H3f3cP02301 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.21□□□□□ -0.13
H3f3cP02301 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H3f3cP02301 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.21□□□□□ -0.13
H3f3cP02301 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms