Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.15■□□□□ 0.34
CopeO89079 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CopeO89079 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Gm27000-201ENSMUST00000182943 842 ntBASIC17.15■□□□□ 0.34
CopeO89079 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CopeO89079 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CopeO89079 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CopeO89079 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.15■□□□□ 0.34
CopeO89079 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CopeO89079 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.14■□□□□ 0.33
CopeO89079 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
CopeO89079 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CopeO89079 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CopeO89079 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CopeO89079 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CopeO89079 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
CopeO89079 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.13■□□□□ 0.33
CopeO89079 Gm20049-201ENSMUST00000219950 730 ntBASIC17.13■□□□□ 0.33
CopeO89079 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CopeO89079 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.13■□□□□ 0.33
CopeO89079 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.13■□□□□ 0.33
CopeO89079 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CopeO89079 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CopeO89079 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CopeO89079 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CopeO89079 Gm9731-201ENSMUST00000209480 747 ntBASIC17.12■□□□□ 0.33
CopeO89079 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CopeO89079 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CopeO89079 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CopeO89079 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CopeO89079 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CopeO89079 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CopeO89079 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CopeO89079 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.11■□□□□ 0.33
CopeO89079 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms