Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm715-201ENSMUST00000117865 831 ntBASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm7638-201ENSMUST00000121348 967 ntBASIC11.75□□□□□ -0.53
Sh2d1aO88890 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm38027-201ENSMUST00000192315 235 ntBASIC11.75□□□□□ -0.53
Sh2d1aO88890 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.75□□□□□ -0.53
Sh2d1aO88890 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh2d1aO88890 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm17661-201ENSMUST00000170317 270 ntBASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.74□□□□□ -0.53
Sh2d1aO88890 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.74□□□□□ -0.53
Sh2d1aO88890 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh2d1aO88890 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.73□□□□□ -0.53
Sh2d1aO88890 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Gm9731-201ENSMUST00000209480 747 ntBASIC11.73□□□□□ -0.53
Sh2d1aO88890 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Timm23-208ENSMUST00000226683 750 ntBASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms