Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrnO55106 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrnO55106 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
StrnO55106 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrnO55106 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.22■□□□□ 0.51
StrnO55106 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
StrnO55106 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.22■□□□□ 0.51
StrnO55106 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
StrnO55106 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.21■□□□□ 0.51
StrnO55106 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.21■□□□□ 0.51
StrnO55106 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.21■□□□□ 0.51
StrnO55106 Gm27867-201ENSMUST00000184778 125 ntBASIC18.21■□□□□ 0.51
StrnO55106 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.21■□□□□ 0.51
StrnO55106 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
StrnO55106 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
StrnO55106 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
StrnO55106 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
StrnO55106 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
StrnO55106 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.2■□□□□ 0.5
StrnO55106 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
StrnO55106 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
StrnO55106 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
StrnO55106 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
StrnO55106 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.19■□□□□ 0.5
StrnO55106 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.19■□□□□ 0.5
StrnO55106 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
StrnO55106 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
StrnO55106 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
StrnO55106 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.19■□□□□ 0.5
StrnO55106 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
StrnO55106 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
StrnO55106 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
StrnO55106 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.18■□□□□ 0.5
StrnO55106 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.18■□□□□ 0.5
StrnO55106 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.18■□□□□ 0.5
StrnO55106 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
StrnO55106 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.18■□□□□ 0.5
StrnO55106 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
StrnO55106 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.17■□□□□ 0.5
StrnO55106 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
StrnO55106 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.17■□□□□ 0.5
StrnO55106 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.17■□□□□ 0.5
StrnO55106 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
StrnO55106 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
StrnO55106 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrnO55106 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
StrnO55106 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms