Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Gm13418-201ENSMUST00000119097 944 ntBASIC18.23■□□□□ 0.51
Trdmt1O55055 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Gm4535-201ENSMUST00000182274 558 ntBASIC18.23■□□□□ 0.51
Trdmt1O55055 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.23■□□□□ 0.51
Trdmt1O55055 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Gm10355-201ENSMUST00000097146 517 ntBASIC18.23■□□□□ 0.51
Trdmt1O55055 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Gm5364-201ENSMUST00000216789 889 ntBASIC18.22■□□□□ 0.51
Trdmt1O55055 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdmt1O55055 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.22■□□□□ 0.51
Trdmt1O55055 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Trdmt1O55055 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.21■□□□□ 0.51
Trdmt1O55055 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.21■□□□□ 0.51
Trdmt1O55055 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.21■□□□□ 0.51
Trdmt1O55055 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trdmt1O55055 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdmt1O55055 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.2■□□□□ 0.5
Trdmt1O55055 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Trdmt1O55055 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.2■□□□□ 0.5
Trdmt1O55055 Gm7230-201ENSMUST00000173026 815 ntBASIC18.2■□□□□ 0.5
Trdmt1O55055 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdmt1O55055 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trdmt1O55055 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trdmt1O55055 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.19■□□□□ 0.5
Trdmt1O55055 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.19■□□□□ 0.5
Trdmt1O55055 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.19■□□□□ 0.5
Trdmt1O55055 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trdmt1O55055 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Gm8000-201ENSMUST00000188378 592 ntBASIC18.19■□□□□ 0.5
Trdmt1O55055 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.19■□□□□ 0.5
Trdmt1O55055 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdmt1O55055 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trdmt1O55055 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms