Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm13312-201ENSMUST00000119631 718 ntBASIC14.02□□□□□ -0.17
Cxcl13O55038 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl13O55038 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.02□□□□□ -0.17
Cxcl13O55038 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl13O55038 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cxcl13O55038 Birc2-201ENSMUST00000054878 378 ntBASIC14.02□□□□□ -0.17
Cxcl13O55038 Gm7461-201ENSMUST00000058918 827 ntBASIC14.02□□□□□ -0.17
Cxcl13O55038 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl13O55038 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl13O55038 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl13O55038 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.01□□□□□ -0.17
Cxcl13O55038 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Rprl3-201ENSMUST00000157400 290 ntBASIC14.01□□□□□ -0.17
Cxcl13O55038 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.01□□□□□ -0.17
Cxcl13O55038 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cxcl13O55038 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl13O55038 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl13O55038 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cxcl13O55038 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Gm15372-201ENSMUST00000120729 834 ntBASIC14□□□□□ -0.17
Cxcl13O55038 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Gm45606-201ENSMUST00000209836 2795 ntBASIC14□□□□□ -0.17
Cxcl13O55038 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14□□□□□ -0.17
Cxcl13O55038 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl13O55038 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cxcl13O55038 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Cxcl13O55038 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cxcl13O55038 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.99□□□□□ -0.17
Cxcl13O55038 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.99□□□□□ -0.17
Cxcl13O55038 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.99□□□□□ -0.17
Cxcl13O55038 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cxcl13O55038 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl13O55038 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms