Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Prom1O54990 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Prom1O54990 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.25■□□□□ 0.51
Prom1O54990 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Prom1O54990 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Prom1O54990 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.25■□□□□ 0.51
Prom1O54990 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.24■□□□□ 0.51
Prom1O54990 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Gm1401-201ENSMUST00000122048 772 ntBASIC18.24■□□□□ 0.51
Prom1O54990 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.24■□□□□ 0.51
Prom1O54990 Gm8969-201ENSMUST00000199694 526 ntBASIC18.24■□□□□ 0.51
Prom1O54990 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.24■□□□□ 0.51
Prom1O54990 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Prom1O54990 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.24■□□□□ 0.51
Prom1O54990 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prom1O54990 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.23■□□□□ 0.51
Prom1O54990 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Prom1O54990 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Gm12350-201ENSMUST00000121208 462 ntBASIC18.23■□□□□ 0.51
Prom1O54990 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Gm10060-201ENSMUST00000212002 111 ntBASIC18.23■□□□□ 0.51
Prom1O54990 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prom1O54990 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.23■□□□□ 0.51
Prom1O54990 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Prom1O54990 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.22■□□□□ 0.51
Prom1O54990 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.22■□□□□ 0.51
Prom1O54990 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.22■□□□□ 0.51
Prom1O54990 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Prom1O54990 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Prom1O54990 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prom1O54990 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.22■□□□□ 0.51
Prom1O54990 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Prom1O54990 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.21■□□□□ 0.51
Prom1O54990 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.21■□□□□ 0.51
Prom1O54990 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prom1O54990 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Prom1O54990 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.21■□□□□ 0.51
Prom1O54990 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Prom1O54990 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prom1O54990 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prom1O54990 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.21■□□□□ 0.5
Prom1O54990 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms