Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Abca4O35600 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Abca4O35600 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.53■□□□□ 0.08
Abca4O35600 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Abca4O35600 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Gm13365-201ENSMUST00000121188 973 ntBASIC15.53■□□□□ 0.08
Abca4O35600 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.53■□□□□ 0.08
Abca4O35600 Gm27646-201ENSMUST00000183989 110 ntBASIC15.53■□□□□ 0.08
Abca4O35600 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.53■□□□□ 0.08
Abca4O35600 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Abca4O35600 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.52■□□□□ 0.08
Abca4O35600 Gm27300-201ENSMUST00000184085 97 ntBASIC15.52■□□□□ 0.08
Abca4O35600 Gm27335-201ENSMUST00000184758 97 ntBASIC15.52■□□□□ 0.08
Abca4O35600 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.52■□□□□ 0.08
Abca4O35600 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.52■□□□□ 0.08
Abca4O35600 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.52■□□□□ 0.08
Abca4O35600 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Abca4O35600 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.52■□□□□ 0.08
Abca4O35600 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Abca4O35600 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Abca4O35600 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.52■□□□□ 0.07
Abca4O35600 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Gm12490-201ENSMUST00000120255 560 ntBASIC15.52■□□□□ 0.07
Abca4O35600 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.52■□□□□ 0.07
Abca4O35600 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.52■□□□□ 0.07
Abca4O35600 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Abca4O35600 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Abca4O35600 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Abca4O35600 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.51■□□□□ 0.07
Abca4O35600 Gm25948-201ENSMUST00000175334 112 ntBASIC15.51■□□□□ 0.07
Abca4O35600 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.51■□□□□ 0.07
Abca4O35600 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.51■□□□□ 0.07
Abca4O35600 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Abca4O35600 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Abca4O35600 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.51■□□□□ 0.07
Abca4O35600 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.51■□□□□ 0.07
Abca4O35600 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca4O35600 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.5■□□□□ 0.07
Abca4O35600 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Abca4O35600 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Abca4O35600 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Abca4O35600 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Gm11745-201ENSMUST00000121669 448 ntBASIC15.5■□□□□ 0.07
Abca4O35600 Gm27301-201ENSMUST00000184012 127 ntBASIC15.5■□□□□ 0.07
Abca4O35600 Gm43433-201ENSMUST00000196573 481 ntBASIC15.5■□□□□ 0.07
Abca4O35600 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.5■□□□□ 0.07
Abca4O35600 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.5■□□□□ 0.07
Abca4O35600 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.5■□□□□ 0.07
Abca4O35600 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca4O35600 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms