Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1aO35526 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Stx1aO35526 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Stx1aO35526 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Stx1aO35526 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Stx1aO35526 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.68■□□□□ 0.58
Stx1aO35526 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.68■□□□□ 0.58
Stx1aO35526 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stx1aO35526 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
Stx1aO35526 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.67■□□□□ 0.58
Stx1aO35526 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Stx1aO35526 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Stx1aO35526 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stx1aO35526 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
Stx1aO35526 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.66■□□□□ 0.58
Stx1aO35526 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.66■□□□□ 0.58
Stx1aO35526 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Stx1aO35526 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stx1aO35526 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.66■□□□□ 0.58
Stx1aO35526 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Stx1aO35526 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Stx1aO35526 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.65■□□□□ 0.58
Stx1aO35526 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.65■□□□□ 0.58
Stx1aO35526 Gm20049-201ENSMUST00000219950 730 ntBASIC18.65■□□□□ 0.58
Stx1aO35526 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stx1aO35526 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.65■□□□□ 0.58
Stx1aO35526 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Stx1aO35526 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Stx1aO35526 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.64■□□□□ 0.57
Stx1aO35526 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.64■□□□□ 0.57
Stx1aO35526 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stx1aO35526 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Stx1aO35526 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.63■□□□□ 0.57
Stx1aO35526 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stx1aO35526 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms