Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Gm13474-201ENSMUST00000122466 815 ntBASIC14.43□□□□□ -0.1
Atf6bO35451 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.43□□□□□ -0.1
Atf6bO35451 Gm18958-201ENSMUST00000174258 762 ntBASIC14.43□□□□□ -0.1
Atf6bO35451 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
Atf6bO35451 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.43□□□□□ -0.1
Atf6bO35451 Gm7370-201ENSMUST00000219471 767 ntBASIC14.43□□□□□ -0.1
Atf6bO35451 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.43□□□□□ -0.1
Atf6bO35451 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atf6bO35451 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf6bO35451 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.42□□□□□ -0.1
Atf6bO35451 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf6bO35451 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atf6bO35451 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.42□□□□□ -0.1
Atf6bO35451 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf6bO35451 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.42□□□□□ -0.1
Atf6bO35451 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atf6bO35451 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf6bO35451 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6bO35451 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.42□□□□□ -0.1
Atf6bO35451 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Atf6bO35451 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Atf6bO35451 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Dancr-204ENSMUST00000132389 2347 ntBASIC14.41□□□□□ -0.1
Atf6bO35451 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.41□□□□□ -0.1
Atf6bO35451 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.41□□□□□ -0.1
Atf6bO35451 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atf6bO35451 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.41□□□□□ -0.1
Atf6bO35451 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.41□□□□□ -0.1
Atf6bO35451 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6bO35451 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.41□□□□□ -0.1
Atf6bO35451 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.41□□□□□ -0.1
Atf6bO35451 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atf6bO35451 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atf6bO35451 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atf6bO35451 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.4□□□□□ -0.1
Atf6bO35451 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6bO35451 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Atf6bO35451 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Atf6bO35451 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atf6bO35451 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atf6bO35451 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.39□□□□□ -0.11
Atf6bO35451 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Atf6bO35451 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.39□□□□□ -0.11
Atf6bO35451 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.39□□□□□ -0.11
Atf6bO35451 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf6bO35451 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms