Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Gm20049-201ENSMUST00000219950 730 ntBASIC13.15□□□□□ -0.3
Efnb3O35393 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.15□□□□□ -0.3
Efnb3O35393 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Efnb3O35393 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Efnb3O35393 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Efnb3O35393 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Efnb3O35393 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Efnb3O35393 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.14□□□□□ -0.31
Efnb3O35393 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.14□□□□□ -0.31
Efnb3O35393 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Efnb3O35393 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.14□□□□□ -0.31
Efnb3O35393 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Efnb3O35393 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Efnb3O35393 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Efnb3O35393 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.13□□□□□ -0.31
Efnb3O35393 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Dio3-201ENSMUST00000097228 1449 ntBASIC13.13□□□□□ -0.31
Efnb3O35393 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Efnb3O35393 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Efnb3O35393 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Efnb3O35393 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.12□□□□□ -0.31
Efnb3O35393 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.12□□□□□ -0.31
Efnb3O35393 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.12□□□□□ -0.31
Efnb3O35393 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Efnb3O35393 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Efnb3O35393 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.12□□□□□ -0.31
Efnb3O35393 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms