Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Dctn1O08788 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dctn1O08788 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Dctn1O08788 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Dctn1O08788 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.42■□□□□ 0.86
Dctn1O08788 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Dctn1O08788 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Dctn1O08788 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Dctn1O08788 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.42■□□□□ 0.86
Dctn1O08788 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.42■□□□□ 0.86
Dctn1O08788 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.41■□□□□ 0.86
Dctn1O08788 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Gm1401-201ENSMUST00000122048 772 ntBASIC20.41■□□□□ 0.86
Dctn1O08788 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.41■□□□□ 0.86
Dctn1O08788 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Dctn1O08788 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Dctn1O08788 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dctn1O08788 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Dctn1O08788 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Dctn1O08788 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.4■□□□□ 0.86
Dctn1O08788 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dctn1O08788 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dctn1O08788 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dctn1O08788 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Dctn1O08788 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Dctn1O08788 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Dctn1O08788 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Dctn1O08788 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Dctn1O08788 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.39■□□□□ 0.85
Dctn1O08788 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.39■□□□□ 0.85
Dctn1O08788 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.39■□□□□ 0.85
Dctn1O08788 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Dctn1O08788 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.39■□□□□ 0.85
Dctn1O08788 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.39■□□□□ 0.85
Dctn1O08788 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.39■□□□□ 0.85
Dctn1O08788 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dctn1O08788 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.38■□□□□ 0.85
Dctn1O08788 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Dctn1O08788 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.38■□□□□ 0.85
Dctn1O08788 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Dctn1O08788 Gm10060-201ENSMUST00000212002 111 ntBASIC20.38■□□□□ 0.85
Dctn1O08788 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Dctn1O08788 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Dctn1O08788 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Dctn1O08788 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Dctn1O08788 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Dctn1O08788 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dctn1O08788 Gm8969-201ENSMUST00000199694 526 ntBASIC20.37■□□□□ 0.85
Dctn1O08788 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms