Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.97■□□□□ 0.47
Ube3aO08759 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ube3aO08759 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Gm13168-201ENSMUST00000121771 632 ntBASIC17.97■□□□□ 0.47
Ube3aO08759 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Gm37025-201ENSMUST00000195159 829 ntBASIC17.97■□□□□ 0.47
Ube3aO08759 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Trmt13-210ENSMUST00000198454 880 ntBASIC17.97■□□□□ 0.47
Ube3aO08759 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.97■□□□□ 0.47
Ube3aO08759 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3aO08759 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Ube3aO08759 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ube3aO08759 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.97■□□□□ 0.47
Ube3aO08759 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3aO08759 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Ube3aO08759 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ube3aO08759 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.96■□□□□ 0.47
Ube3aO08759 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Gm37292-201ENSMUST00000192062 758 ntBASIC17.96■□□□□ 0.47
Ube3aO08759 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.96■□□□□ 0.47
Ube3aO08759 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.96■□□□□ 0.47
Ube3aO08759 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3aO08759 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ube3aO08759 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ube3aO08759 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.95■□□□□ 0.46
Ube3aO08759 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.95■□□□□ 0.46
Ube3aO08759 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.95■□□□□ 0.46
Ube3aO08759 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ube3aO08759 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ube3aO08759 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.95■□□□□ 0.46
Ube3aO08759 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ube3aO08759 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3aO08759 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.94■□□□□ 0.46
Ube3aO08759 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.94■□□□□ 0.46
Ube3aO08759 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.94■□□□□ 0.46
Ube3aO08759 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ube3aO08759 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ube3aO08759 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ube3aO08759 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3aO08759 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ube3aO08759 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube3aO08759 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube3aO08759 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ube3aO08759 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Ube3aO08759 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3aO08759 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.93■□□□□ 0.46
Ube3aO08759 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3aO08759 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3aO08759 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ube3aO08759 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3aO08759 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms