Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Polr2jO08740 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Polr2jO08740 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Polr2jO08740 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Polr2jO08740 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Gm15378-201ENSMUST00000121894 207 ntBASIC15.93■□□□□ 0.14
Polr2jO08740 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.93■□□□□ 0.14
Polr2jO08740 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.93■□□□□ 0.14
Polr2jO08740 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.93■□□□□ 0.14
Polr2jO08740 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Polr2jO08740 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Polr2jO08740 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.92■□□□□ 0.14
Polr2jO08740 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Gm12085-201ENSMUST00000119263 940 ntBASIC15.92■□□□□ 0.14
Polr2jO08740 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.92■□□□□ 0.14
Polr2jO08740 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.92■□□□□ 0.14
Polr2jO08740 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Polr2jO08740 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Polr2jO08740 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Polr2jO08740 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Gm5643-201ENSMUST00000117081 966 ntBASIC15.91■□□□□ 0.14
Polr2jO08740 Gm7638-201ENSMUST00000121348 967 ntBASIC15.91■□□□□ 0.14
Polr2jO08740 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Polr2jO08740 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Polr2jO08740 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Polr2jO08740 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Polr2jO08740 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.9■□□□□ 0.14
Polr2jO08740 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Polr2jO08740 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Polr2jO08740 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.9■□□□□ 0.14
Polr2jO08740 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.9■□□□□ 0.14
Polr2jO08740 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2jO08740 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Polr2jO08740 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2jO08740 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2jO08740 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.89■□□□□ 0.13
Polr2jO08740 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.89■□□□□ 0.13
Polr2jO08740 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.89■□□□□ 0.13
Polr2jO08740 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2jO08740 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms