Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ScaperF8VQ70 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21■□□□□ 0.95
ScaperF8VQ70 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21■□□□□ 0.95
ScaperF8VQ70 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21■□□□□ 0.95
ScaperF8VQ70 Gm2213-201ENSMUST00000197485 688 ntBASIC21■□□□□ 0.95
ScaperF8VQ70 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ScaperF8VQ70 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21■□□□□ 0.95
ScaperF8VQ70 Gm43294-201ENSMUST00000202850 2490 ntBASIC21■□□□□ 0.95
ScaperF8VQ70 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ScaperF8VQ70 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.99■□□□□ 0.95
ScaperF8VQ70 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.99■□□□□ 0.95
ScaperF8VQ70 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.99■□□□□ 0.95
ScaperF8VQ70 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ScaperF8VQ70 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ScaperF8VQ70 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ScaperF8VQ70 Gm7862-201ENSMUST00000121461 292 ntBASIC20.97■□□□□ 0.95
ScaperF8VQ70 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.97■□□□□ 0.95
ScaperF8VQ70 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.97■□□□□ 0.95
ScaperF8VQ70 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ScaperF8VQ70 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Gm6376-201ENSMUST00000209407 580 ntBASIC20.96■□□□□ 0.95
ScaperF8VQ70 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.96■□□□□ 0.95
ScaperF8VQ70 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ScaperF8VQ70 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms