Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc149F6V035 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc149F6V035 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc149F6V035 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc149F6V035 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc149F6V035 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.81■□□□□ 0.28
Ccdc149F6V035 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.81■□□□□ 0.28
Ccdc149F6V035 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc149F6V035 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc149F6V035 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.8■□□□□ 0.28
Ccdc149F6V035 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.8■□□□□ 0.28
Ccdc149F6V035 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc149F6V035 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.79■□□□□ 0.28
Ccdc149F6V035 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Mir8098-201ENSMUST00000184011 137 ntBASIC16.79■□□□□ 0.28
Ccdc149F6V035 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Mzt1-203ENSMUST00000227948 952 ntBASIC16.79■□□□□ 0.28
Ccdc149F6V035 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.79■□□□□ 0.28
Ccdc149F6V035 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.79■□□□□ 0.28
Ccdc149F6V035 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc149F6V035 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.78■□□□□ 0.28
Ccdc149F6V035 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.78■□□□□ 0.28
Ccdc149F6V035 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.78■□□□□ 0.28
Ccdc149F6V035 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms