Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.58■□□□□ 0.4
Rfx8D3YU81 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rfx8D3YU81 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Gm26039-201ENSMUST00000158152 144 ntBASIC17.56■□□□□ 0.4
Rfx8D3YU81 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx8D3YU81 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Gm21559-201ENSMUST00000220638 855 ntBASIC17.55■□□□□ 0.4
Rfx8D3YU81 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Gm8587-201ENSMUST00000076538 843 ntBASIC17.55■□□□□ 0.4
Rfx8D3YU81 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx8D3YU81 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Gm18115-201ENSMUST00000221209 621 ntBASIC17.54■□□□□ 0.4
Rfx8D3YU81 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx8D3YU81 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.54■□□□□ 0.4
Rfx8D3YU81 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms