Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm12887B1AVM1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Gm10493-201ENSMUST00000097270 612 ntBASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm12887B1AVM1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Mir6349-201ENSMUST00000184059 97 ntBASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm12887B1AVM1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Gm6211-202ENSMUST00000167849 925 ntBASIC13.46□□□□□ -0.25
Gm12887B1AVM1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Gm10033-202ENSMUST00000211874 928 ntBASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.46□□□□□ -0.25
Gm12887B1AVM1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms