Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.44□□□□□ -0.26
Chd6A3KFM7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Gm13829-201ENSMUST00000119600 138 ntBASIC13.44□□□□□ -0.26
Chd6A3KFM7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd6A3KFM7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Gm44430-201ENSMUST00000203376 995 ntBASIC13.43□□□□□ -0.26
Chd6A3KFM7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.43□□□□□ -0.26
Chd6A3KFM7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.43□□□□□ -0.26
Chd6A3KFM7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.43□□□□□ -0.26
Chd6A3KFM7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd6A3KFM7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.42□□□□□ -0.26
Chd6A3KFM7 BC021767-201ENSMUST00000126387 1716 ntBASIC13.42□□□□□ -0.26
Chd6A3KFM7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.42□□□□□ -0.26
Chd6A3KFM7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd6A3KFM7 Gm14928-201ENSMUST00000120198 477 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.41□□□□□ -0.26
Chd6A3KFM7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd6A3KFM7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.4□□□□□ -0.26
Chd6A3KFM7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.4□□□□□ -0.26
Chd6A3KFM7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd6A3KFM7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.4□□□□□ -0.27
Chd6A3KFM7 Gm11745-201ENSMUST00000121669 448 ntBASIC13.4□□□□□ -0.27
Chd6A3KFM7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.4□□□□□ -0.27
Chd6A3KFM7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chd6A3KFM7 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.4□□□□□ -0.27
Chd6A3KFM7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms