Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm9885-202ENSMUST00000186234 2209 ntBASIC8.72□□□□□ -1.01
Ubr4A2AN08 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm3695-201ENSMUST00000087222 1009 ntBASIC8.72□□□□□ -1.01
Ubr4A2AN08 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ubr4A2AN08 Gm4459-201ENSMUST00000118750 468 ntBASIC8.71□□□□□ -1.01
Ubr4A2AN08 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Gm29707-201ENSMUST00000196325 491 ntBASIC8.71□□□□□ -1.01
Ubr4A2AN08 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Ubr4A2AN08 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Syt7-204ENSMUST00000223586 1344 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gm13453-201ENSMUST00000118708 357 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Snord83b-201ENSMUST00000104546 94 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Mir5132-201ENSMUST00000175166 71 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 AC159106.1-201ENSMUST00000224421 690 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Gm11661-201ENSMUST00000121761 1327 ntBASIC8.71□□□□□ -1.02
Ubr4A2AN08 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ubr4A2AN08 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Gm5682-201ENSMUST00000173402 505 ntBASIC8.7□□□□□ -1.02
Ubr4A2AN08 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Ubr4A2AN08 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms