Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm28729A0A1B0GSW2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.14■□□□□ 0.18
Gm28729A0A1B0GSW2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm28729A0A1B0GSW2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28729A0A1B0GSW2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Mir5131-201ENSMUST00000175426 93 ntBASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm28729A0A1B0GSW2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Gm28729A0A1B0GSW2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm18206-201ENSMUST00000207027 926 ntBASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms