Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm45546-201ENSMUST00000211053 2394 ntBASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Gm3880A0A1B0GSB3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm10584-201ENSMUST00000207036 2628 ntBASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm10620-201ENSMUST00000098379 1332 ntBASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC8.23□□□□□ -1.09
Gm3880A0A1B0GSB3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Gm3880A0A1B0GSB3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Gm3880A0A1B0GSB3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Gm3880A0A1B0GSB3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms