Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC10.47□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm13534-201ENSMUST00000121169 513 ntBASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Gm9959-201ENSMUST00000068277 390 ntBASIC10.46□□□□□ -0.73
Igkv8-27A0A0G2JF28 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-27A0A0G2JF28 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm12922-201ENSMUST00000120626 809 ntBASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-27A0A0G2JF28 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm13146-201ENSMUST00000118508 780 ntBASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC10.44□□□□□ -0.74
Igkv8-27A0A0G2JF28 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms